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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905276.1_cds_XP_016455487.1_49415
CDS Infomation

[gene=LOC107779552] [db_xref=GeneID:107779552] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g06840] [protein_id=XP_016455487.1] [location=complement(join(95675..96025,96483..96617,97124..97374,98054..98105,98468..98748,98859..99017,99108..99616,99983..100051,100193..100276,100368..100439,100579..100647,100762..100830,101493..101567,101703..101774,102030..102101,102195..102338,102666..102737,102868..102939,103724..103877,105380..105473))] [gbkey=CDS]
Sequence

ATGGAGGGAGTAAGATATTCTGGATATGTTTTTACTACGGCAATTTATTGTTTTATGCTA
CTTACAGTTGCTCAAGTTACTCATCCTTCTGAAGTCTCAGCTTTGGTATCTGTAAAAAGT
GGTTTAGTTGATAATAAGGAGTATCTGAAGGATTGGCAGAAGGGTACTGATCCATGTTTA
TCAAACTGGACTGAAGTTTATTGTTTTAACAAAGTTGGAGAATATGGGTACTTGCATGTC
AGAGAGCTCCGTTTGATGAATATGAATCTTTCTGGAAGTTTAGCTCCTGAGCTTGGACAA
CTATCCCATCTTAAAATTATGAATTTCATGTGGAATGATTTGACTGGAAGTGTACCGGGA
GAGATTGGAAAAATCAAGTCTTTGAAACTTCTGCTCTTGAACGGAAACCGATTTTCAGGA
TCTTTACCTGATCAGCTTGGATATCTCTGGAACCTGAGAATATTCCAGATAGACCAGAAC
CAGATATCTGGAAGCATTCCTAAATCCTTTTCCCATTTAAATAGTATGCAACATATCCAC
TTCAACAACAACTCATTAAGTGGTCAAATCCCTAAAGAGCTTTCCAATATCTCCACTCTG
ATTCACTTGCTTTTGGACAATAATAATCTTTCAGGATACCTTCCTCCTGAGTTTTCAGCA
TTTCCGTCTATTCGGATAATCCAACTTGATAACAACAATTTCACCCGTTCCGAGGTTCCA
GCTTCTTATGGAAACATTTCATCATTAGTGAAACTAAGTCTCAGAAATTGCAAGTTGCAA
GGATCCATTCCTGATCTTAGCAGAATACAGAACCTAAGCTATCTTGATCTCAGCTGGAAT
CAACTGTCTGGATCAATACCTCAGAATAAGCTTTCCAACAATATGACAACTATTATTCTG
TCACACAATCGTCTTGATGGATCTATTCCGAAGAGCTTTCAATCTCTTCCTTCTTTGCAG
AAACTGTCAGTGGAGAACAATCTTTTGAATGGTTCCTTTTCTACCGACATTTGGCAAAAG
AAGTTTACTTCAACTTCCAGACTTGTGATTGATCTTCGGAATAATTCACTTTCAGACATT
TCGAGTACTCTTGAACCTCCTCCGAATGTCACTATAAGGTTGCAGGGAAATCCTGTGTGC
AGCAATGAGAATGTAAGAAACATCATCAAATTCTGTGGTTCTGAAGCCAGAGCAGAACAT
GAGACAAGTAACTCGACGAATGTAAATGGCTCTTGTCCTATTCATGCATGCCCTAAGGAT
AACTATTATGAATATGTCCCAACATCACCTGTTCCTTGCTCTTGTGCCTCACCTCTAAGA
GTTGGATGGCGGCTGAAAAGTCCTAGTTTTTCTTACTTTGATCCATATGCGCATTATTTT
TTGCTGTATATGACTAGTGATCTTCATTTGGACCTTAACCAAATGTTGATTGAATCAAGT
TCTTGGGAAGAAGGACCTCGTCTCCGAATGCACTTGAAGGTTTTCCCAGCAGTTGGTGTC
AGTACATTTAATAAAAGTGAGGTCATTCGTATCAGCGAGCTTTTCTCATCTTGGGATATC
AGTGTAGTTGACCTTTTCGGACCTTATGAACTTCTTAACTTCACTCTGCTGGGACCTTAT
TCGTACTTGAATCCTGATATTCAAGCTAAACATAAAAGCAAAGGTGCTTTGATAGCTGCA
ATTGTAGCAGGTGTTTTTGCTGCATTTGTTTCAACAATTATCGCTGTGTTAATCAAAAGA
CAACATGCCAAATACCAAAGCATCTTATCATCTAGGAAACGTTTATCCTCAAGGCTCTCT
ATAAAAATGGATGGCATTAAAAGCTTCACTTTCAGAGAAATGAATATTGCCACTAACAAC
TTTGATAACTCAAATCAAGTTGGGGAAGGAGGATATGGGACTGTTTTTAAGGGAATTTTA
GCTGACAAAACAATCGTTGCTATCAAACGAGCAAAAGAAGGATCGCTACAAGGGCAAAAG
GAATTCTTGACAGAGATATCGTTGTTATCAAGGTTACATCACCGAAATCTAGTTTCGTTG
CTAGGATACTGTGATGAAGGAGAACAGATGCTGGTTTATGAGTTCATGTGCAATGGAACT
TTGCGAAACTGGATTTCTGTTACATGTAAAGAGAGTTTGAAGTTTGGAGCAAGATTACAG
ATTGCATTGGGTGCAGCTAAGGGCATCCTTTACCTTCATACAGAAGCTCACCCGCCGATA
TTCCACAGGGACATCAAAGCCAGCAATATTCTTCTAGACTCTAAAATGACAGCTAAAGTA
GCTGATTTTGGATTGTCTAGGCTTGCACCTGTCCAAGATGATGAAGGTGTATTACCTAAT
CATGTATCAACTATTGTGAAGGGAACACCTGGATACCTTGATCCTGAATATTTCTTGACC
CGTAAATTGACTGATAAAAGTGATGTCTATAGTCTTGGAGTTGTATTTCTGGAAATCTTA
ACCGGCATGCGCCCAATCTCACACGGGAAAAACATTGTTCGCGAGGTACACTTGGCTCAG
GACTCGGAGAAGATGTACTCAGTCATGGACAGTACAATGGGACCTTATCCTTCTGAATGC
ATGGAAAAGTTTGCGGCTTTGGCCCTTAAGTGTTGCGAGGACAAACCAGAAGACAGACCT
TCAATGTTAGAAGTGGTCAGGGAGTTGGAAACTATTCAATCTATTCTCAACATGATTCCA
GATACTGAAGCCGACACAGTAGATTCTAAAGCCAAGTTTAATGAACCAAAGTCATCGTCT
TCATTTTCCGAAACCACTAGCAGAGATGCATTTCTATCATCTGATGTAATGGGAGGTTAC
AGTTTCAGTGGTGTCAGTCTCACTATGCCTCGCTAA

Peptide Sequence

PEP ID

XP_016455487.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Nicotiana tabacum]
Sequence

MEGVRYSGYVFTTAIYCFMLLTVAQVTHPSEVSALVSVKSGLVDNKEYLKDWQKGTDPCL
SNWTEVYCFNKVGEYGYLHVRELRLMNMNLSGSLAPELGQLSHLKIMNFMWNDLTGSVPG
EIGKIKSLKLLLLNGNRFSGSLPDQLGYLWNLRIFQIDQNQISGSIPKSFSHLNSMQHIH
FNNNSLSGQIPKELSNISTLIHLLLDNNNLSGYLPPEFSAFPSIRIIQLDNNNFTRSEVP
ASYGNISSLVKLSLRNCKLQGSIPDLSRIQNLSYLDLSWNQLSGSIPQNKLSNNMTTIIL
SHNRLDGSIPKSFQSLPSLQKLSVENNLLNGSFSTDIWQKKFTSTSRLVIDLRNNSLSDI
SSTLEPPPNVTIRLQGNPVCSNENVRNIIKFCGSEARAEHETSNSTNVNGSCPIHACPKD
NYYEYVPTSPVPCSCASPLRVGWRLKSPSFSYFDPYAHYFLLYMTSDLHLDLNQMLIESS
SWEEGPRLRMHLKVFPAVGVSTFNKSEVIRISELFSSWDISVVDLFGPYELLNFTLLGPY
SYLNPDIQAKHKSKGALIAAIVAGVFAAFVSTIIAVLIKRQHAKYQSILSSRKRLSSRLS
IKMDGIKSFTFREMNIATNNFDNSNQVGEGGYGTVFKGILADKTIVAIKRAKEGSLQGQK
EFLTEISLLSRLHHRNLVSLLGYCDEGEQMLVYEFMCNGTLRNWISVTCKESLKFGARLQ
IALGAAKGILYLHTEAHPPIFHRDIKASNILLDSKMTAKVADFGLSRLAPVQDDEGVLPN
HVSTIVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEILTGMRPISHGKNIVREVHLAQ
DSEKMYSVMDSTMGPYPSECMEKFAALALKCCEDKPEDRPSMLEVVRELETIQSILNMIP
DTEADTVDSKAKFNEPKSSSSFSETTSRDAFLSSDVMGGYSFSGVSLTMPR

Transcript Sequence

Gene sequence data has not been registered.